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EpiStack v1 — FLF competition
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analyses
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covid
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hypotheses
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merged
Folder: v1/analyses/covid/hypotheses/merged
28 items under this folder.
Jul 23, 2026
H-1 - Rootclaim- SARS-CoV-2 was an accidental lab escape of a gain-of-function-engineered virus (~89%)
Jul 23, 2026
H-10 - The Huanan market was the initial epicenter, with human-to-human spread taking over
Jul 23, 2026
H-12 - Judge Eric Stansifer- zoonotic spillover at the Huanan Seafood Market is the more likely origin (high confidence)
Jul 23, 2026
H-13 - Judge Eric Stansifer- a WIV gain-of-function lab leak is the less likely origin (P about 0.075%, ~1-in-1300)
Jul 23, 2026
H-17 - SARS-CoV-2 most likely originated from a research-related incident rather than natural zoonosis (Weissman synthesis)
Jul 23, 2026
H-2 - Rootclaim- SARS-CoV-2 was an engineered bioweapon deliberately released (~4.5%)
Jul 23, 2026
H-20 - SARS-CoV-2 was introduced to the Huanan market via cold-chain - frozen imported products
Jul 23, 2026
H-21 - The Huanan market was the early epicenter of the pandemic via the live-wildlife trade
Jul 23, 2026
H-22 - SARS-CoV-2's furin cleavage site was inserted via DEFUSE-type gain-of-function engineering at the WIV-EcoHealth-UNC consortium
Jul 23, 2026
H-23 - Susceptible wildlife sold at Huanan market wildlife stall A (raccoon dogs and-or related mammals) were the intermediate host of the SARS-CoV-2 spillover
Jul 23, 2026
H-24 - SARS-CoV-2 emerged at the Huanan market rather than circulating in the Wuhan community beforehand
Jul 23, 2026
H-25 - Pangolins and bats were not the Huanan-market intermediate host or vector
Jul 23, 2026
H-26 - The Wuhan market wildlife trade was a viable SARS-CoV-2 spillover route
Jul 23, 2026
H-27 - US intelligence- the FBI and DOE assess a lab-associated Wuhan origin of COVID-19 as most likely
Jul 23, 2026
H-28 - US intelligence- a plurality of tasked agencies assess a natural animal origin of COVID-19 as most likely (low confidence)
Jul 23, 2026
H-3 - Rootclaim- SARS-CoV-2 was a naturally-evolved virus contracted by researchers (zoonotic collection, ~3.2%)
Jul 23, 2026
H-31 - SARS-CoV-2 arose by natural evolution, not laboratory engineering
Jul 23, 2026
H-32 - SARS-CoV-2's human-adapted features arose by natural selection in an animal host before zoonotic transfer
Jul 23, 2026
H-33 - Some SARS-CoV-2 features arose by natural selection during cryptic human-to-human transmission after an early spillover
Jul 23, 2026
H-34 - SARS-CoV-2 originated as an infectious clone assembled in vitro (a reverse-genetics system)
Jul 23, 2026
H-35 - SARS-CoV-2's restriction map was designed to enable RBD swaps and furin-site insertion at S1-S2
Jul 23, 2026
H-36 - Wild bat sarbecoviruses able to infect humans via hACE2 without adaptation circulate in the Indochinese peninsula
Jul 23, 2026
H-37 - SARS-CoV-2's human-ACE2-binding RBD and backbone arose by natural recombination among wild bat viruses
Jul 23, 2026
H-38 - SARS-CoV-2's furin cleavage site was acquired separately, by a route not represented in the closest bat relatives
Jul 23, 2026
H-39 - SARS-CoV-2 is a laboratory-engineered chimera (RaTG13-like backbone + pangolin-like RBD + site-directed furin site)
Jul 23, 2026
H-4 - Rootclaim- SARS-CoV-2 arose by natural zoonotic spillover (~3.2%)
Jul 23, 2026
H-40 - SARS-CoV-2's RBD-hACE2 fit was perfected by serial passage in cell culture or humanized-ACE2 animals
Jul 23, 2026
H-6 - The A-B intermediate haplotypes did not genuinely circulate in humans
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interactive Bayesian view — separate from the graph above
added after the FLF submission deadline